STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swp_0734Conserved hypothetical protein. (66 aa)    
Predicted Functional Partners:
swp_3248
Phage shock protein B.
  
 
 0.975
swp_1617
PAS domain protein.
   
 
 0.954
swp_4451
Sensory box histidine kinase/response regulator.
   
 
 0.954
swp_3249
Phage shock protein A.
  
 
 0.913
swp_0818
PspA/IM30.
  
 
 0.903
swp_1351
Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt.
   
 
 0.854
swp_1720
PAS domain protein.
  
 
 0.698
swp_0311
Sensor histidine kinase, putative.
  
  
 0.597
swp_2416
PAS domain protein.
  
  
 0.597
swp_0695
Peptidase S1, chymotrypsin:PDZ/DHR/GLGF.
  
  
 0.591
Your Current Organism:
Shewanella piezotolerans
NCBI taxonomy Id: 225849
Other names: S. piezotolerans WP3, Shewanella piezotolerans WP3, Shewanella piezotolerans str. WP3, Shewanella piezotolerans strain WP3, Shewanella sp. WP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.