STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swp_1634Beta-glucosidase. (433 aa)    
Predicted Functional Partners:
swp_1637
Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal.
 
 
 0.957
swp_2670
Alpha amylase, catalytic region.
 
 
 0.953
swp_1623
Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal.
 
 
 0.948
swp_2453
Alpha-glucosidase, putative.
   
 
  0.900
swp_2676
Alpha-glucosidase.
   
 
  0.900
swp_2525
Hypothetical protein swp_2525.
  
  
 0.871
swp_3424
Phage Tail Collar.
   
   0.700
swp_1632
Galactose operon repressor.
  
 0.641
swp_1633
Sugar:cation symporter family protein.
 
    0.614
kdkA
Lipopolysaccharide kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
    
 0.614
Your Current Organism:
Shewanella piezotolerans
NCBI taxonomy Id: 225849
Other names: S. piezotolerans WP3, Shewanella piezotolerans WP3, Shewanella piezotolerans str. WP3, Shewanella piezotolerans strain WP3, Shewanella sp. WP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.