STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swp_2930Conserved hypothetical protein. (286 aa)    
Predicted Functional Partners:
swp_5058
ADP-heptose:LPS heptosyltransferase, putative.
  
     0.659
swp_2931
Hypothetical protein swp_2931.
       0.615
swp_3277
Decaheme cytochrome c.
  
     0.554
swp_3275
Decaheme cytochrome c.
  
     0.538
swp_2123
Peptidase S8 and S53, subtilisin, kexin, sedolisin:Cadherin.
  
    0.490
swp_1412
Sodium:dicarboxylate symporter family/bacterial extracellular solute-binding family 3 protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.451
swp_2383
Peptidyl-dipeptidase A.
  
     0.449
swp_2932
Methyl-accepting chemotaxis protein, putative.
       0.430
swp_2933
Hypothetical protein swp_2933.
       0.430
swp_0721
Decaheme cytochrome c.
  
     0.426
Your Current Organism:
Shewanella piezotolerans
NCBI taxonomy Id: 225849
Other names: S. piezotolerans WP3, Shewanella piezotolerans WP3, Shewanella piezotolerans str. WP3, Shewanella piezotolerans strain WP3, Shewanella sp. WP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.