STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP15_2143Conserved hypothetical protein. (369 aa)    
Predicted Functional Partners:
HP15_2142
Conserved hypothetical protein, secreted.
 
     0.934
HP15_2145
Conserved hypothetical protein.
 
   
 0.888
HP15_2140
Tetratricopeptide TPR_2 repeat protein.
 
     0.881
HP15_2141
Protein containing tetratricopeptide repeats.
 
   
 0.879
HP15_2146
Conserved hypothetical protein, secreted.
 
     0.860
HP15_2147
Conserved hypothetical protein.
 
     0.852
HP15_2134
Conserved hypothetical protein.
 
     0.824
HP15_2136
Biopolymer transport protein ExbD/TolR.
 
     0.822
HP15_2150
ATPase.
 
   
 0.821
HP15_2149
Conserved hypothetical protein.
 
     0.819
Your Current Organism:
Marinobacter adhaerens
NCBI taxonomy Id: 225937
Other names: M. adhaerens HP15, Marinobacter adhaerens HP15, Marinobacter adhaerens str. HP15, Marinobacter adhaerens strain HP15, marine bacterium HP15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.