STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP15_3781Electron transport protein SCO1/SenC. (223 aa)    
Predicted Functional Partners:
HP15_3779
Cytochrome oxidase assembly protein.
 
 
 0.825
HP15_3771
Membrane protein containing cytochrome c oxidase, subunit II domain; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.811
HP15_3778
Cytochrome c oxidase assembly protein.
 
 
 0.810
HP15_3608
Membrane protein containing redoxin domain.
 
 
 0.796
cyoE2
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.773
HP15_3776
Conserved hypothetical protein, membrane.
 
  
 0.746
HP15_3782
RNA helicase, ATP-dependent DEAH box, HrpB type.
       0.702
HP15_846
DR1885-like metal-binding protein.
 
   
 0.665
HP15_3773
Cytochrome c oxidase assembly protein CtaG/Cox11.
 
 
 0.629
HP15_2280
Periplasmic protein thiol: disulfide oxidoreductase DsbE.
 
 
 0.590
Your Current Organism:
Marinobacter adhaerens
NCBI taxonomy Id: 225937
Other names: M. adhaerens HP15, Marinobacter adhaerens HP15, Marinobacter adhaerens str. HP15, Marinobacter adhaerens strain HP15, marine bacterium HP15
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