STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANY61795.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)    
Predicted Functional Partners:
ANY61794.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
MA05_06360
methionine--tRNA ligase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
ANY62056.1
Cytochrome c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.893
ANY62055.1
Cytochrome c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
 0.871
ANY63626.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
ANY63350.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.725
rnpB
RNase P RNA component class A; Derived by automated computational analysis using gene prediction method: cmsearch; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.698
ANY61734.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.694
ANY61793.1
YeeE/YedE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.688
ANY61792.1
Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.629
Your Current Organism:
Comamonas aquatica
NCBI taxonomy Id: 225991
Other names: ATCC 11330, Aquaspirillum aquaticum, C. aquatica, CCUG 15845, CCUG 17395, Commamonas terrigena DNA group 2, DSM 9155, LMG 2370, LMG:2370, NBRC 14918
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.