STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANY63644.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
ANY62416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.984
ANY62285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.978
ANY61113.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.946
ANY61936.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.910
ANY62454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.881
ANY61339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.876
ANY62972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.832
ANY62207.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.782
ANY62214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.781
ANY61001.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.769
Your Current Organism:
Comamonas aquatica
NCBI taxonomy Id: 225991
Other names: ATCC 11330, Aquaspirillum aquaticum, C. aquatica, CCUG 15845, CCUG 17395, Commamonas terrigena DNA group 2, DSM 9155, LMG 2370, LMG:2370, NBRC 14918
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