STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQZ98872.1FUSC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)    
Predicted Functional Partners:
AQZ98871.1
Hypothetical protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
   
 0.956
AQZ98873.1
Multidrug transporter subunit MdtN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.952
AQZ98870.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
AQZ98874.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.800
AQZ99383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.731
AQZ99479.1
Iron-sulfur cluster scaffold-like protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.648
Your Current Organism:
Comamonas kerstersii
NCBI taxonomy Id: 225992
Other names: Acidovorax sp. 121606, Acidovorax sp. 202149, C. kerstersii, CCUG 15333, Comamonas kerstersii Wauters et al. 2003, Commamonas terrigena DNA group 3, DSM 16026, LMG 3475, LMG:3475, strain AF61
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