Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EF_0076Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to TIGR protein family HMM TIGR01832. (297 aa)    
Predicted Functional Partners:
EF_0077
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02699.
       0.790
EF_0078
Conserved hypothetical protein; Similar to GB:U09117, SP:P51178, and PID:483920; identified by sequence similarity; putative.
       0.744
EF_0079
Gls24 protein; Similar to GB:M81753, SP:P35488, PID:141809, GB:M81753, SP:P35488, and PID:141809; identified by sequence similarity; putative.
       0.714
EF_1794
Conserved hypothetical protein; Identified by match to TIGR protein family HMM TIGR00181.
 
    0.662
EF_0080
Gls24 protein; Similar to GB:M81753, SP:P35488, PID:141809, GB:M81753, SP:P35488, and PID:141809; identified by sequence similarity; putative.
       0.566
EF_0074
Transcriptional regulator, Crp/Fnr family; Similar to GP:10172843; identified by sequence similarity; putative.
  
 0.516
EF_1364
acetyl-CoA acetyltransferase/hydroxymethylglutaryl-CoA reductase, degradative; Similar to GP:9937384, SP:P17161, GB:X03147, and PID:43926; identified by sequence similarity; putative.
  
 
 0.514
EF_0081
Membrane protein, putative; Identified by match to PFAM protein family HMM PF04226.
  
    0.511
fabD
Malonyl CoA-acyl carrier protein transacylase; Similar to SP:P07049, and PID:455284; identified by sequence similarity; putative.
  
 
 0.477
EF_0377
Identified by match to PFAM protein family HMM PF00023.
   
 0.463
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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