STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaBRhamnulokinase, putative; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. (494 aa)    
Predicted Functional Partners:
rhaA
L-rhamnose isomerase; Similar to SP:P32170; identified by sequence similarity; putative; Belongs to the rhamnose isomerase family.
 
 
 0.999
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
 
 0.999
rhaM
Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.988
xylA
Xylose isomerase; Similar to SP:O82845; identified by sequence similarity; putative; Belongs to the xylose isomerase family.
  
  
 0.826
EF_0432
Transcriptional regulator, AraC family; Identified by match to PFAM protein family HMM PF00165.
 
   
 0.635
rpe
Ribulose-phosphate 3-epimerase; Similar to SP:P29088, and PID:40792; identified by sequence similarity; putative; Belongs to the ribulose-phosphate 3-epimerase family.
   
 
 0.618
EF_0438
Conserved domain protein; Identified by match to PFAM protein family HMM PF03809.
 
  
 0.609
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.562
EF_0437
Transcriptional regulator, AraC family; Identified by match to PFAM protein family HMM PF00165.
 
   
 0.474
araD
L-ribulose-5-phosphate 4-epimerase; Similar to GB:J02888, GB:U07729, GB:U07731, GB:U07732, GB:U07733, GB:U07734, GB:U07735, GB:U07736, SP:P16083, PID:190818, and PID:516534; identified by sequence similarity; putative.
  
  
 0.470
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.