Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EF_0752Conserved hypothetical protein; Similar to GP:12724585; identified by sequence similarity; putative. (259 aa)    
Predicted Functional Partners:
EF_0755
Conserved hypothetical protein; Similar to GP:4894282; identified by sequence similarity; putative.
 
    0.889
EF_0753
Identified by match to PFAM protein family HMM PF03388.
 
     0.814
EF_3183
Cell wall surface anchor family protein, putative; Similar to GP:4894282; identified by sequence similarity; putative.
 
    0.797
EF_2682
Conserved hypothetical protein; Similar to GP:4894282, and GP:16409928; identified by sequence similarity; putative.
 
    0.789
EF_0751
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    
0.776
EF_0711
Conserved hypothetical protein; Similar to GP:4894282, and GP:4894282; identified by sequence similarity; putative.
 
     0.773
EF_2969
Conserved hypothetical protein; Similar to GP:4894282, and GP:16409928; identified by sequence similarity; putative.
 
    0.772
EF_1176
Conserved hypothetical protein; Similar to GP:4894282, and GP:4894282; identified by sequence similarity; putative.
 
    0.771
EF_2253
Conserved hypothetical protein; Similar to GP:4894282, and GP:4894282; identified by sequence similarity; putative.
 
     0.765
EF_0750
Cell wall surface anchor family protein; Identified by match to TIGR protein family HMM TIGR01167.
       0.727
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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