STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_0803Conserved hypothetical protein; Similar to GB:M29874, GB:M29873, SP:P20813, and PID:181294; identified by sequence similarity; putative. (147 aa)    
Predicted Functional Partners:
EF_0802
Hypothetical protein; Identified by Glimmer2; putative.
       0.678
EF_0753
Identified by match to PFAM protein family HMM PF03388.
  
     0.501
pip
Phage infection protein; Similar to SP:P49022, and SP:P49022; identified by sequence similarity; putative.
  
     0.481
EF_0804
Amino acid ABC transporter, amino acid-binding protein; Similar to GP:3603430; identified by sequence similarity; putative.
       0.459
EF_0805
Amino acid ABC transporter, ATP-binding protein; Similar to GB:X65561, and PID:296267; identified by sequence similarity; putative.
       0.448
EF_0806
Amino acid ABC transporter, permease protein; Similar to GB:X69602, PID:436322, and PID:928989; identified by sequence similarity; putative.
       0.440
EF_0922
Membrane protein, putative; Identified by match to PFAM protein family HMM PF03151.
  
     0.435
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.