Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EF_0809Membrane protein, putative; Identified by match to PFAM protein family HMM PF04226. (82 aa)    
Predicted Functional Partners:
EF_2071
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.694
EF_2072
Aminotransferase, class V; Similar to GP:10173876; identified by sequence similarity; putative.
      
 0.694
EF_0807
Pheromone binding protein, putative; Similar to GP:8131705; identified by sequence similarity; putative.
       0.571
EF_0079
Gls24 protein; Similar to GB:M81753, SP:P35488, PID:141809, GB:M81753, SP:P35488, and PID:141809; identified by sequence similarity; putative.
 
  
 0.483
EF_0080
Gls24 protein; Similar to GB:M81753, SP:P35488, PID:141809, GB:M81753, SP:P35488, and PID:141809; identified by sequence similarity; putative.
 
  
 0.466
EF_0604
Gls24 protein; Similar to GB:M81753, SP:P35488, PID:141809, GB:U09117, SP:P51178, and PID:483920; identified by sequence similarity; putative.
 
  
 0.447
EF_2036
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.445
EF_1180
Conserved hypothetical protein; Similar to GP:7291092; identified by sequence similarity; putative; Belongs to the UPF0337 (CsbD) family.
  
  
 0.439
EF_1368
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.429
EF_1794
Conserved hypothetical protein; Identified by match to TIGR protein family HMM TIGR00181.
 
  
 0.423
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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