Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EF_1237Conserved hypothetical protein; Similar to GP:7635808; identified by sequence similarity; putative. (254 aa)    
Predicted Functional Partners:
EF_1236
Acetyl xylan esterase, putative; Similar to GB:Z35136, SP:P42876, and PID:511069; identified by sequence similarity; putative.
 
     0.865
EF_1238
Glycosyl hydrolase, family 3; Similar to GB:M60851, SP:P24401, PID:149562, PID:1771121, PID:1777435, GB:K03192, and PID:181322; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 3 family.
 
     0.865
EF_1235
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.840
EF_1239
Conserved hypothetical protein; Similar to GP:16414341; identified by sequence similarity; putative.
 
     0.823
EF_1240
Sugar-binding transcriptional regulator, LacI family; Similar to GB:M83910, SP:P05806, and PID:143243; identified by sequence similarity; putative.
 
     0.786
EF_1234
ABC transporter, substrate-binding protein, putative; Similar to GP:10174531; identified by sequence similarity; putative.
       0.621
EF_1708
Conserved hypothetical protein; Similar to GP:10173404, and GP:12724495; identified by sequence similarity; putative.
 
    0.580
EF_1233
ABC transporter, permease protein; Similar to GP:10173094, and SP:P39129; identified by sequence similarity; putative.
       0.577
EF_2217
Alpha-1,2-mannosidase, putative; Similar to GP:5759293; identified by sequence similarity; putative.
  
     0.565
EF_1232
ABC transporter, permease protein; Similar to GP:10174529; identified by sequence similarity; putative.
       0.554
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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