Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EF_1982Universal stress protein family; Similar to GP:10175807; identified by sequence similarity; putative. (157 aa)    
Predicted Functional Partners:
EF_1980
Hypothetical protein; Identified by Glimmer2; putative.
       0.801
EF_1981
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
kdpD
Sensor histidine kinase KdpD; Similar to GB:D13184, SP:Q08784, PID:602761, GB:D13184, SP:Q08784, and PID:602761; identified by sequence similarity; putative.
      
 0.608
sodA
Superoxide dismutase, Mn; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.525
ogt
methylated-DNA--protein-cysteine S-methyltransferase; Similar to GP:9946904; identified by sequence similarity; putative.
  
  
 0.456
EF_1871
Identified by match to TIGR protein family HMM TIGR00385.
  
  
 0.448
EF_3036
Thioredoxin family protein; Similar to SP:P05528, GB:M24253, GB:X07875, PID:41981, and PID:551887; identified by sequence similarity; putative.
  
  
 0.448
fer
Ferredoxin; Similar to SP:P50727, GB:Z25821, GB:Z25822, GB:Z25823, GB:Z25824, SP:P42126, PID:472987, PID:511635, and PID:825689; identified by sequence similarity; putative.
      
 0.413
yfiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
  
 0.408
EF_3233
Dps family protein; Similar to GB:Z26850, GB:S56948, and PID:407169; identified by sequence similarity; putative; Belongs to the Dps family.
  
  
 0.400
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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