Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
comG6Competence protein; Similar to GP:3287181, and GP:3287181; identified by sequence similarity; putative. (144 aa)    
Predicted Functional Partners:
comG2
Competence protein; Similar to GP:3287184; identified by sequence similarity; putative.
  
  
 0.986
comG3
Competence protein; Similar to GP:3211750, and GP:3211750; identified by sequence similarity; putative.
  
  
 0.968
comG1
Competence protein; Similar to GP:3211748; identified by sequence similarity; putative.
  
  
 0.955
EF_1985
Hypothetical protein; Identified by Glimmer2; putative.
       0.874
EF_1800
Conserved hypothetical protein; Similar to GP:3367754, and GP:23325667; identified by sequence similarity; putative.
  
  
 0.804
EF_1987
Identified by match to TIGR protein family HMM TIGR01707.
       0.773
ebsB
EbsB protein; Seems to play some role in the cell surface expression of a chromosomally encoded receptor, named enterococcal binding substance (EBS), that mediates mating aggregate formation. Might interfere with the synthesis or assembly of EBS and function as a cell wall hydrolase.
      
 0.743
EF_2604
Conserved hypothetical protein; Similar to GP:10176360; identified by sequence similarity; putative.
  
     0.726
EF_0462
Conserved domain protein; Similar to SP:P54485; identified by sequence similarity; putative.
  
     0.725
EF_3236
Type III leader peptidase family; Similar to GB:D16670, SP:P37701, and PID:391654; identified by sequence similarity; putative.
  
  
 0.666
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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