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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_2004Conserved domain protein. (116 aa)    
Predicted Functional Partners:
EF_2006
Hypothetical protein; Identified by Glimmer2; putative.
       0.690
EF_2008
Ribosomal protein L23, putative.
       0.661
EF_2007
Identified by match to TIGR protein family HMM TIGR01725.
       0.659
EF_2005
Major tail protein, putative; Similar to GP:3341920; identified by sequence similarity; putative.
       0.613
EF_2002
Tail protein, putative; Similar to GP:5730310; identified by sequence similarity; putative.
       0.463
EF_2003
Tape measure protein, putative; Good homology to pblA from Streptococcus mitis phage SM1; similar to GP:11177172, and GP:11177172; identified by sequence similarity; putative.
       0.436
EF_2001
Minor structural protein; Similar to pblB in Streptococcus mitis phage SM1; identified by match to TIGR protein family HMM TIGR01665.
       0.435
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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