STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_2014Coenzyme F420 hydrogenase domain protein. (76 aa)    
Predicted Functional Partners:
EF_2015
Minor head protein, putative; Identified by match to PFAM protein family HMM PF04233.
       0.773
EF_2016
Portal protein; Similar to GP:10176156; identified by sequence similarity; putative.
       0.773
EF_2017
Terminase, large subunit, putative; Similar to GP:2765137; identified by sequence similarity; putative.
       0.762
EF_2018
Conserved hypothetical protein; Similar to GP:10176158, and GP:13346844; identified by sequence similarity; putative.
       0.762
EF_2013
Hypothetical protein; Identified by Glimmer2; putative.
       0.603
EF_2019
Hypothetical protein; Identified by Glimmer2; putative.
       0.557
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.