STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_2098Hypothetical protein; Identified by Glimmer2; putative. (186 aa)    
Predicted Functional Partners:
EF_2097
Hypothetical protein; Identified by Glimmer2; putative.
       0.797
EF_2095
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
EF_2096
Tail protein; Identified by match to PFAM protein family HMM PF02615.
       0.773
EF_2094
Identified by match to TIGR protein family HMM TIGR01742.
       0.746
EF_2099
Hypothetical protein; Identified by Glimmer2; putative.
       0.637
EF_2092
Hypothetical protein; Identified by Glimmer2; putative.
       0.636
EF_2093
Endolysin domain protein; Similar to GB:X53872, SP:P22233, and PID:21340; identified by sequence similarity; putative.
       0.636
EF_2089
Hypothetical protein; Identified by Glimmer2; putative.
       0.623
EF_2090
Identified by match to PFAM protein family HMM PF01391.
       0.623
EF_2091
Hypothetical protein; Identified by Glimmer2; putative.
       0.623
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.