STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_3120Serine/threonine protein kinase; Similar to SP:P30772, and PID:581339; identified by sequence similarity; putative. (718 aa)    
Predicted Functional Partners:
EF_3121
Protein phosphatase 2C, putative; Similar to SP:P30772, and PID:581339; identified by sequence similarity; putative.
 
 0.999
sun
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
  
 0.949
rsgA
Conserved hypothetical protein TIGR00157; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.906
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.902
rpe
Ribulose-phosphate 3-epimerase; Similar to SP:P29088, and PID:40792; identified by sequence similarity; putative; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.824
EF_3117
Identified by match to PFAM protein family HMM PF04265.
  
  
 0.794
pbpC
Penicillin-binding protein C; Similar to SP:P13551, GB:X52165, SP:P13551, and GB:X52165; identified by sequence similarity; putative.
  
 
 0.765
gpsB
Cell division protein DivIVA, putative; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
 
 0.755
divIVA
Cell division protein DivIVA; Similar to GP:4009475, and GP:4009475; identified by sequence similarity; putative.
  
 
 0.724
gmk-2
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
     0.722
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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