STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmG-4Ribosomal protein L33; Similar to GB:M14219, SP:P07585, PID:181170, and PID:609452; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)    
Predicted Functional Partners:
rpsI
Ribosomal protein S9; Similar to SP:P21470; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.957
rpmF-2
Ribosomal protein L32; Similar to SP:O34101; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL32 family.
  
 
 0.931
rpsN-3
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.914
rpmB
Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.
  
 
 0.906
rpmF-1
Ribosomal protein L32; Similar to SP:Q9CJA6; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL32 family.
  
 
 0.905
rpmG-2
Ribosomal protein L33; Similar to GB:M96982, SP:Q01081, and PID:338263; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.904
rpmG-3
Ribosomal protein L33; Similar to GB:M94579, GB:S70516, GB:S40178, GB:S79774, SP:P19835, PID:1567198, PID:180244, PID:187150, and PID:29501; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.
  
  
 
0.902
rpmG-1
Ribosomal protein L33; Similar to GB:M94579, GB:S70516, GB:S40178, GB:S79774, SP:P19835, PID:1567198, PID:180244, PID:187150, and PID:29501; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.
  
  
 
0.901
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
  
 
 0.898
rpmJ
Ribosomal protein L36; Identified by match to PFAM protein family HMM PF00444; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.896
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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