Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0063Hypothetical protein. (66 aa)    
Predicted Functional Partners:
BT_0064
Hypothetical protein.
  
    0.733
BT_0062
Hypothetical protein.
  
    0.637
BT_0061
Tyrosine-protein kinase ptk-like.
  
    0.632
BT_0060
Putative polysaccharide export protein; GumB-like protein.
  
    0.629
BT_0065
Alpha-galactosidase precursor.
  
    0.622
BT_0059
Conserved hypothetical protein.
  
    0.530
BT_0058
Hypothetical protein; Ankyrin.
  
    0.513
BT_0066
Major outer membrane protein OmpA.
  
    0.412
BT_0056
Putative glycosyltransferase; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase-like.
  
    0.408
BT_0057
Hypothetical protein.
  
    0.403
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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