Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_0127Putative transmembrane protein; Belongs to the glycosyl hydrolase 28 family. (1097 aa)    
Predicted Functional Partners:
BT_0126
Six-hairpin glycosidase.
 
   0.860
BT_1826
Conserved hypothetical protein; tRNA-binding arm.
 
    0.753
BT_0263
Six-hairpin glycosidase.
  
     0.729
BT_0288
Conserved hypothetical protein; Myosin heavy chain-like.
 
     0.710
BT_0277
Coagulation factor 5/8 type, C-terminal.
 
     0.684
BT_3677
Conserved hypothetical protein.
  
    0.680
BT_3662
Putative endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
 
     0.665
BT_0264
Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
    0.642
BT_0275
Conserved hypothetical protein.
  
 
   0.628
BT_0276
Concanavalin A-like lectin/glucanase.
  
    0.628
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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