STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_0161Putative permease. (391 aa)    
Predicted Functional Partners:
BT_0162
Penicillin-binding protein 1C (PBP-1c).
       0.814
BT_0160
Conserved hypothetical protein.
       0.654
BT_0158
Na(+)/H(+) antiporter.
  
  
 0.637
BT_0163
Putative outer membrane protein.
       0.628
BT_0164
Putative outer membrane protein, alpha-2-macroglobulin-like protein.
       0.628
BT_1261
Peptidase.
 
 
    0.627
BT_3967
Putative two-component system sensor protein histidine kinase.
   
  
 0.469
BT_0159
Conserved hypothetical protein.
  
    0.465
BT_0165
Peptidyl-prolyl cis-trans isomerase.
  
    0.454
BT_0166
Thiol-disulfide isomerase-like.
       0.442
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.