Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0240TPR-repeat-containing protein. (584 aa)    
Predicted Functional Partners:
BT_0239
Thiol:disulfide interchange protein.
  
    0.670
BT_1175
Conserved hypothetical protein.
  
    0.650
BT_0210
Leucine-rich repeat protein.
  
    0.633
BT_3198
Conserved hypothetical protein.
  
     0.629
BT_4645
SusC homolog.
  
    0.613
BT_3624
Conserved hypothetical protein.
  
    0.609
BT_2538
Conserved hypothetical protein, histone-like family.
 
    0.588
BT_0592
Conserved hypothetical protein.
  
    0.581
BT_4191
Hypothetical protein.
  
    0.573
BT_1668
Conserved hypothetical protein, TonB-like protein.
  
    0.571
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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