Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BT_0259Putative amidohydrolase. (261 aa)    
Predicted Functional Partners:
gdhA
Glutamate dehydrogenase.
  
 
 0.924
BT_1973
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.924
BT_0553
Glutamate synthase, large subunit.
    
 0.923
BT_4310
NADPH-dependent glutamate synthase small chain.
  
 0.920
BT_3184
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 
 0.917
BT_1476
Aspartate aminotransferase.
  
 
 0.913
BT_2415
Aspartate aminotransferase.
  
 
 0.913
BT_0552
Glutamate synthase, small subunit.
  
 0.911
BT_2071
Isocitrate dehydrogenase (NADP).
  
 
  0.839
BT_2510
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.832
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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