Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_0331Ketoisovalerate oxidoreductase subunit vorB. (295 aa)    
Predicted Functional Partners:
BT_1747
Pyruvate-flavodoxin oxidoreductase.
  
 0.998
BT_0330
Ketoisovalerate oxidoreductase subunit vorA.
 
 0.997
BT_0333
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 0.996
BT_0332
2-oxoisovalerate oxidoreductase beta subunit.
  
 0.994
BT_0329
Ketoisovalerate oxidoreductase subunit vorA.
 
 0.992
BT_2837
2-oxoglutarate synthase subunit korB.
 
 0.986
BT_2836
2-oxoglutarate synthase subunit korA.
 
0.968
BT_3755
Acetyl-coenzyme A synthetase.
 
 
 0.941
BT_2090
methylmalonyl-CoA mutase large subunit.
  
 
 0.938
BT_2091
methylmalonyl-CoA mutase small subunit.
  
 
 0.938
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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