Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0352Conserved hypothetical protein; DEATH-like. (120 aa)    
Predicted Functional Partners:
BT_0354
NUDIX family hydrolase.
  
    0.859
BT_0355
Na+/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.829
AraD
Putative sugar epimerase/aldolase.
  
    0.788
BT_0356
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
  
    0.740
BT_0350
Xylulose kinase (xylulokinase).
  
    0.713
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
    0.668
BT_0348
alpha-L-arabinofuranosidase.
  
    0.536
BT_0349
Acetyl-CoA carboxylase, biotin carboxylase.
  
    0.448
hisF
Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
  
 0.439
BT_4151
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
   
    0.429
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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