Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0385Conserved hypothetical protein. (386 aa)    
Predicted Functional Partners:
BT_0386
Putative F420H2-dehydrogenase.
    0.963
BT_0468
Putative F420H2-dehydrogenase 40 kDa subunit.
    0.840
BT_0041
F420H2:quinone oxidoreductase.
    0.829
BT_0604
Coenzyme F420-reducing hydrogenase beta subunit homolog.
     0.801
BT_0384
Hypothetical protein.
  
    0.791
BT_0387
NADH dehydrogenase subunit 2.
  
    0.788
BT_0389
Putative galactoside acetyltransferase.
  
  
 0.743
BT_0388
Galactoside O-acetyltransferase.
  
  
 0.737
BT_0390
Putative O-antigen export protein.
  
  
 0.728
BT_0040
Putative transmembrane protein.
 
  
 0.641
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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