Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_0481Polysaccharide export outer membrane protein. (266 aa)    
Predicted Functional Partners:
BT_0482
Tyrosine-protein kinase ptk.
 
 
 0.984
BT_0614
Putative tyrosine-protein kinase in cps region.
 
 
 0.934
BT_2862
Tyrosine-protein kinase ptk.
 
 
 0.933
BT_0061
Tyrosine-protein kinase ptk-like.
 
 
 0.932
BT_0400
Putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region.
 
 
 0.929
BT_0480
Glycosyltransferase.
 
  
 0.884
BT_0399
Tyrosine-protein kinase ptk involved in exopolysaccharide biosynthesis.
 
 
 0.862
BT_0479
Glycoside transferase family 2.
  
  
 0.630
BT_4481
Major outer membrane protein OmpA homolog.
  
 0.543
BT_0468
Putative F420H2-dehydrogenase 40 kDa subunit.
  
    0.537
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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