Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0482Tyrosine-protein kinase ptk. (812 aa)    
Predicted Functional Partners:
BT_0481
Polysaccharide export outer membrane protein.
 
 
 0.984
BT_0480
Glycosyltransferase.
 
  
 0.968
BT_0398
Polysaccharide export outer membrane protein.
 
 
 0.938
BT_0060
Putative polysaccharide export protein; GumB-like protein.
 
 
 0.934
BT_0613
Homolog to EPS I polysaccharide export outer membrane protein.
 
 
 0.934
BT_2863
Putative polysaccharide export protein.
 
 
 0.933
BT_1708
Putative capsular polysaccharide biosynthesis glycosyltransferase.
 
  
 0.761
BT_0523
Putative glycosyltransferase.
 
  
 0.758
BT_1644
Putative CPS biosynthesis glycosyltransferase.
 
  
 0.757
BT_1356
Putative capsule polysaccharide export protein.
  
 
 0.738
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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