Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BT_0508ABC transporter ATP-binding protein. (609 aa)    
Predicted Functional Partners:
BT_0509
ABC transporter ATP-binding/transmembrane protein.
 
 
0.986
BT_0507
Transcriptional regulator (TetR/AcrR family).
 
  
 0.852
BT_2482
Transcriptional regulator.
 
  
 0.576
BT_1855
Putative methyl transferase.
 
   
 0.557
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.546
BT_3627
ABC transporter, ATP-binding protein.
 
 0.525
BT_3625
Conserved hypothetical protein.
  
  
 0.463
BT_4288
ABC transporter ATP-binding protein.
   
 
 0.449
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
   
 0.445
BT_3055
Succinate dehydrogenase iron-sulfur protein.
  
 
 0.425
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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