STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_0599UDP-glucose 6-dehydrogenase. (438 aa)    
Predicted Functional Partners:
BT_1059
Putative UDP-glucose 4-epimerase.
 
 0.931
BT_1342
Putative UDP-glucuronic acid epimerase.
  
 0.931
BT_0623
Putative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.918
BT_0600
Nucleotide sugar epimerase.
  
 
 0.854
BT_0379
UDP-glucose 6-dehydrogenase.
  
  
 
0.801
BT_0829
UDP-glucose 6-dehydrogenase.
     
 
0.800
BT_1341
UDP-glucose 6-dehydrogenase.
     
 
0.800
BT_0598
Putative nucleoside-diphosphate sugar epimerases/dehydrase.
  
  
 0.760
BT_0382
Capsular polysaccharide biosynthesis protein Cps4K.
  
 
 0.752
BT_0605
Putative polysaccharide export protein.
  
  
 0.623
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.