Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BT_0604Coenzyme F420-reducing hydrogenase beta subunit homolog. (395 aa)    
Predicted Functional Partners:
BT_0603
Conserved hypothetical protein.
    0.955
BT_0042
Nitroreductase-like protein.
    0.817
BT_0385
Conserved hypothetical protein.
     0.801
BT_0605
Putative polysaccharide export protein.
  
    0.796
BT_0607
Serine O-acetyltransferase.
  
    0.631
BT_0606
Hypothetical protein.
  
    0.611
BT_0602
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.556
BT_0601
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.528
BT_0608
Glycoside transferase family 4.
  
    0.456
BT_0600
Nucleotide sugar epimerase.
  
    0.446
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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