STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_0664Conserved hypothetical protein. (382 aa)    
Predicted Functional Partners:
BT_0668
Conserved hypothetical protein.
 
  
 0.928
BT_0662
O-antigen polymerase.
 
    0.905
BT_0669
Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.859
BT_0671
Outer membrane protein TolC, putative.
 
    0.851
BT_0672
Drug efflux protein; Acriflavine resistance-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
    0.844
BT_0667
Signal peptidase I (SPase I); Belongs to the peptidase S26 family.
 
    0.785
BT_0665
Fibronectin, type III-like fold.
  
    0.772
BT_0666
Hypothetical protein.
  
   
0.771
BT_0670
Putative cation efflux system; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
    0.771
BT_3533
O-antigen polymerase.
 
    0.724
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.