Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0786Putative integral membrane protein. (240 aa)    
Predicted Functional Partners:
BT_3198
Conserved hypothetical protein.
  
    0.602
BT_1451
Conserved hypothetical protein.
   
    0.582
BT_0785a
Conserved hypothetical protein; BT-GM0799.
       0.529
BT_1088
Conserved hypothetical protein.
  
    0.516
BT_2930
Conserved hypothetical protein.
  
     0.513
BT_2028
DnaD domain-like protein; Replication-like protein.
  
     0.467
BT_1894
TPR-repeat-containing protein.
  
    0.462
BT_2573
Glutamate/gamma-aminobutyrate anti-porter.
  
    0.445
BT_3797
Possible alpha-galactosidase.
  
    0.435
BT_4327
Conserved hypothetical protein.
  
    0.429
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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