Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0797Transcriptional regulator, ArsR family. (89 aa)    
Predicted Functional Partners:
BT_0799
Thioredoxin fold protein.
 
     0.708
BT_0800
Putative cytochrome c biogenesis protein.
 
     0.688
BT_0798
Redox-active disulfide protein-like protein.
     
 0.616
BT_0801
Arsenical resistance operon trans-acting repressor.
     
 0.545
BT_0803
Integral membrane efflux pump, putative multidrug-efflux transporter.
  
  
 0.539
BT_0802
Arsenical pump-driving ATPase.
  
  
 0.532
BT_2434
Pyridine nucleotide-disulphide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.507
BT_0796
Putative helicase.
       0.441
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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