Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_0798Redox-active disulfide protein-like protein. (77 aa)    
Predicted Functional Partners:
BT_0800
Putative cytochrome c biogenesis protein.
 
 
 0.929
BT_0799
Thioredoxin fold protein.
 
  
 0.895
BT_0112
Putative permease.
 
  
 0.874
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.843
BT_0801
Arsenical resistance operon trans-acting repressor.
  
  
 0.814
BT_0803
Integral membrane efflux pump, putative multidrug-efflux transporter.
  
  
 0.778
BT_0802
Arsenical pump-driving ATPase.
  
  
 0.765
BT_0118
Cytochrome c biogenesis protein, ccdA-like.
 
 
 0.722
BT_0797
Transcriptional regulator, ArsR family.
     
 0.616
BT_0119
Hypothetical protein; Thioredoxin fold.
 
  
 0.604
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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