STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_0803Integral membrane efflux pump, putative multidrug-efflux transporter. (352 aa)    
Predicted Functional Partners:
BT_0802
Arsenical pump-driving ATPase.
  
  
 0.883
BT_0801
Arsenical resistance operon trans-acting repressor.
  
  
 0.824
BT_0798
Redox-active disulfide protein-like protein.
  
  
 0.763
BT_0799
Thioredoxin fold protein.
  
  
 0.761
BT_0800
Putative cytochrome c biogenesis protein.
  
  
 0.761
BT_0115
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.585
BT_0797
Transcriptional regulator, ArsR family.
  
  
 0.546
BT_0116
Arsenical pump-driving ATPase.
  
  
 0.495
BT_0804
Putative carbon-nitrogen hydrolase.
  
    0.492
BT_0117
Arsenical resistance operon trans-acting repressor.
  
  
 0.487
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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