Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_0860Putative ABC transporter ATP-binding protein. (224 aa)    
Predicted Functional Partners:
BT_1215
ABC transporter, permease protein.
 
 0.974
BT_0861
Putative ABC transporter permease.
 
 
 0.958
BT_0862
Putative ABC-transporter permease protein.
 
 
 0.952
BT_0695
ABC transporter, permease protein.
 
 
 0.941
BT_0859
Putative ABC transporter permease.
 
 
 0.928
BT_0863
Putative ABC transporter permease.
 
 
 0.926
BT_0864
Putative permease.
 
 
 0.913
BT_0858
Putative ABC transporter permease.
 
 
 0.908
BT_0693
Putative ABC transport system, membrane protein.
 
 
 0.887
BT_2496
Putative ABC transporter, ATP-binding protein.
 
 0.874
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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