Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_0907BatA; Bacteroides aerotolerance operon. (327 aa)    
Predicted Functional Partners:
BT_0909
Von Willebrand factor-like, type A.
 
  
 0.944
BT_0904
BatD, conserved hypothetical protein.
 
  
 0.931
BT_0905
BatC, conserved hypothetical protein.
  
 0.911
BT_0908
Putative conserved membrane exported protein.
 
  
 0.910
BT_0910
Magnesium chelatase, subunit I.
 
  
 0.905
BT_0903
BatE, TRP domain containing protein.
 
  
 0.890
BT_0906
BatB, conserved hypothetical protein.
 
   
0.833
BT_2212
Magnesium chelatase, subunit I, putative ATPase.
 
  
 0.581
BT_0902
Conserved hypothetical protein.
       0.533
BT_0912
DNA-binding protein HU; Belongs to the bacterial histone-like protein family.
  
    0.499
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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