Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_0960Putative TonB-dependent outer membrane receptor. (613 aa)    
Predicted Functional Partners:
BT_0961
Putative TonB-dependent outer membrane receptor.
    0.935
BT_0959
Putative transmembrane protein.
 
    0.865
BT_0962
Aldo/keto reductase.
  
    0.698
BT_0963
Ferredoxin-type protein napF homolog.
 
    0.680
BT_4719
Conserved hypothetical protein.
  
     0.638
BT_0633
Putative Na+/H+ exchange protein.
  
    0.559
BT_2117
Outer membrane protein, putative.
  
    0.511
BT_1358
Putative transcriptional regulator; Bacteroides fragilis UpaY homolog.
  
    0.501
BT_2659
Conserved hypothetical protein.
  
    0.461
BT_2660
FimX-like protein.
  
    0.454
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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