Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_0989Two-component system sensor histidine kinase. (455 aa)    
Predicted Functional Partners:
BT_0990
Two-component system response regulator.
 
 
 0.960
BT_0682
Two-component system response regulator.
 
 
 0.831
BT_0732
Two-component system response regulator.
 
 
 0.773
BT_0536
Two-component system sensor protein.
 
 
 0.639
BT_0678
Cation efflux system protein czcC.
 
   
 0.625
BT_0928
Two-component system response regulator.
 
 
 0.624
BT_4695
Outer membrane efflux protein precursor.
  
   
 0.621
BT_0524
Putative two-component system response regulator; Phosphate regulon-like transcriptional regulatory protein.
 
 
 0.606
BT_0988
Mg2+ transport ATPase protein B.
 
     0.594
BT_1482
Two-component system response regulator.
 
 
 0.594
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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