STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1024SusD homolog. (765 aa)    
Predicted Functional Partners:
BT_1025
SusC homolog.
 
    0.957
BT_1029
SusC homolog.
 
   0.844
BT_4088
SusC homolog.
 
   0.804
BT_1017
Conserved hypothetical protein.
 
   0.799
BT_3519
SusC homolog.
  
   0.794
BT_4121
SusC homolog.
 
    0.794
BT_1682
SusD homolog.
  
    0.782
BT_2818
SusC homolog.
  
   0.780
BT_0364
SusC homolog.
  
   0.779
BT_0979
Pectin lyase fold/virulence factor.
 
   0.775
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.