Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_1069Conserved hypothetical protein, putative transcriptional regulator. (180 aa)    
Predicted Functional Partners:
BT_1070
Predicted phosphoadenosine phosphosulfate reductase.
 
 
 0.966
BT_2311
Conserved hypothetical protein; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase-like.
 
 
 0.848
BT_1071
Conserved hypothetical protein.
  
    0.802
BT_1064
Rhodopsin-like GPCR superfamily.
 
  
 0.705
BT_1066
Conserved hypothetical protein.
 
  
 0.702
BT_1068
Hypothetical protein.
     
 0.650
BT_1065
Hypothetical protein.
  
  
 0.645
rsmG
Glucose-inhibited division protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.613
BT_1063
Putative lipoprotein.
     
 0.612
BT_1062
Putative lipoprotein.
     
 0.550
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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