Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BT_1114Putative exporter protein. (343 aa)    
Predicted Functional Partners:
BT_1115
Aldo/keto reductase.
 
 
 0.935
BT_1113
Flavodoxin.
 
  
 0.825
BT_1121
Conserved hypothetical protein, with a carboxymuconolactone decarboxylase domain.
 
 
 0.778
BT_1806
acyl-CoA dehydrogenase.
  
 0.740
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.701
BT_1400
Putative hydrolase.
 
 
 0.668
BT_1393
4-carboxymuconolactone decarboxylase.
 
  
 0.643
BT_1116
Conserved hypothetical protein.
  
  
 0.550
BT_1117
Conserved hypothetical protein, with a cAMP-binding domain.
 
  
 0.549
BT_1395
Flavodoxin.
 
     0.546
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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