Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_1306Putative ABC transporter ATP-binding protein. (282 aa)    
Predicted Functional Partners:
BT_1304
Putative transcriptional regulator.
 
    0.943
BT_1305
Conserved hypothetical protein.
  
    0.784
BT_1303
Conserved hypothetical protein.
  
    0.729
BT_1302
Hypothetical protein.
  
    0.693
BT_1535
ABC transporter ATP-binding protein.
  
  
 0.514
BT_3903
Transporter, putative.
  
  
 0.498
BT_0072
Putative ABC transporter, ATP-binding protein.
  
    0.476
lolD
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
  
 0.450
BT_1301
ATP synthase subunit E.
  
    0.415
BT_1300
Conserved hypothetical protein.
  
    0.411
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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