STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1416Putative transmembrane protein. (411 aa)    
Predicted Functional Partners:
BT_1415
Cytochrome c biogenesis protein ccsA.
  
 0.970
nrfA
Cytochrome C552 precursor; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process.
 
  
 0.944
BT_1418
Quinol oxidase.
 
  
 0.915
BT_1414
Conserved hypothetical protein.
 
    0.911
BT_1605
Cytochrome c biogenesis protein.
  
 0.832
BT_0281
Putative DNA-binding protein; HU homolog.
  
 
   0.761
BT_2929
Putative non-specific DNA-binding protein.
  
   0.645
BT_0795
DNA-binding protein-like protein.
  
   0.559
BT_4430
Cytochrome c biogenesis protein (ccsA).
 
  
 0.537
BT_0227
Conserved hypothetical protein.
  
     0.530
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.