Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BT_1483Two-component system sensor histidine kinase. (593 aa)    
Predicted Functional Partners:
BT_1482
Two-component system response regulator.
 
 
 0.966
BT_0732
Two-component system response regulator.
 
 
 0.747
BT_2165
Two-component system response regulator.
 
 
 0.656
BT_1481
Conserved hypothetical protein.
  
   0.655
BT_0990
Two-component system response regulator.
 
 
 0.648
BT_0682
Two-component system response regulator.
 
 
 0.644
trmD
tRNA (Guanine-N(1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
      
 0.595
BT_2094
TonB-dependent receptor.
  
  
 0.586
BT_4236
Two-component system sensor histidine kinase/response regulator, hybrid (one-component system).
 
 
 0.546
BT_0981
Two-component system sensor histidine kinase/response regulator, hybrid (one component system).
 
 
0.538
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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