STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1663Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family. (668 aa)    
Predicted Functional Partners:
susA
Alpha-amylase (neopullulanase) SusA; Neopullulanase that cleaves 1,4-alpha-glucosidic linkages in starch to produce disaccharides or trisaccharides in starch degradation; Belongs to the glycosyl hydrolase 13 family.
  
0.899
BT_1662
Putative molybdenum transport ATP-binding protein.
  
    0.793
BT_0771
1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II).
 
  
0.752
BT_4307
Putative glycogen synthase.
 
  
 0.746
ruvC
Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
    0.721
susG
Alpha-amylase, susG; Alpha-amylase that cleaves starch into oligosaccharides before internalization for degradation, the first step in starch degradation.
  
 0.670
BT_1665
Conserved hypothetical protein.
  
    0.654
BT_1293
Alpha-glucan phosphorylase.
 
  
 0.631
BT_1100
Alpha-glucan phosphorylase.
 
  
 0.622
BT_2146
4-alpha-glucanotransferase.
 
  
 0.617
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.